Tag: G protein-coupled receptors

  • Brown, E. M. et al. Cloning and characterization of an extracellular Ca2+-sensing receptor from bovine parathyroid. Nature 366, 575–580 (1993).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hofer, A. M. & Brown, E. M. Extracellular calcium sensing and signalling. Nat. Rev. Mol. Cell Biol. 4, 530–538 (2003).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Gray, E. et al. Activation of the extracellular calcium-sensing receptor initiates insulin secretion from human islets of Langerhans: involvement of protein kinases. J. Endocrinol. 190, 703–710 (2006).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Mace, O. J., Schindler, M. & Patel, S. The regulation of K- and L-cell activity by GLUT2 and the calcium-sensing receptor CasR in rat small intestine. J. Physiol. 590, 2917–2936 (2012).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ruat, M. & Traiffort, E. Roles of the calcium sensing receptor in the central nervous system. Best Pract. Res. Clin. Endocrinol. Metab. 27, 429–442 (2013).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Conigrave, A. D. & Ward, D. T. Calcium-sensing receptor (CaSR): pharmacological properties and signaling pathways. Best Pract. Res. Clin. Endocrinol. Metab. 27, 315–331 (2013).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hendy, G. N., Guarnieri, V. & Canaff, L. Calcium-sensing receptor and associated diseases. Prog. Mol. Biol. Transl. Sci. 89, 31–95 (2009).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • de Jesus Ferreira, M. C. et al. Co-expression of a Ca2+-inhibitable adenylyl cyclase and of a Ca2+-sensing receptor in the cortical thick ascending limb cell of the rat kidney. Inhibition of hormone-dependent cAMP accumulation by extracellular Ca2+. J. Biol. Chem. 273, 15192–15202 (1998).

    Article 
    PubMed 

    Google Scholar
     

  • Kifor, O. et al. Regulation of MAP kinase by calcium-sensing receptor in bovine parathyroid and CaR-transfected HEK293 cells. Am. J. Physiol. Renal Physiol. 280, F291–F302 (2001).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Mamillapalli, R., VanHouten, J., Zawalich, W. & Wysolmerski, J. Switching of G-protein usage by the calcium-sensing receptor reverses its effect on parathyroid hormone-related protein secretion in normal versus malignant breast cells. J. Biol. Chem. 283, 24435–24447 (2008).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Mamillapalli, R. & Wysolmerski, J. The calcium-sensing receptor couples to Gαs and regulates PTHrP and ACTH secretion in pituitary cells. J. Endocrinol. 204, 287–297 (2010).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Huang, C., Hujer, K. M., Wu, Z. & Miller, R. T. The Ca2+-sensing receptor couples to Gα12/13 to activate phospholipase D in Madin-Darby canine kidney cells. Am. J. Physiol. Cell Physiol. 286, C22–C30 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Abid, H. A., Inoue, A. & Gorvin, C. M. Heterogeneity of G protein activation by the calcium-sensing receptor. J. Mol. Endocrinol. 67, 41–53 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Liang, Y. L. et al. Dominant negative G proteins enhance formation and purification of agonist-GPCR-G protein complexes for structure determination. ACS Pharmacol. Transl. Sci. 1, 12–20 (2018).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Nehme, R. et al. Mini-G proteins: novel tools for studying GPCRs in their active conformation. PLoS ONE 12, e0175642 (2017).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Geng, Y. et al. Structural mechanism of ligand activation in human calcium-sensing receptor. eLife 5, e13662 (2016).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Zhang, C. et al. Structural basis for regulation of human calcium-sensing receptor by magnesium ions and an unexpected tryptophan derivative co-agonist. Sci. Adv. 2, e1600241 (2016).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Nemeth, E. F. Allosteric modulators of the extracellular calcium receptor. Drug Discov. Today Technol.10, e277–e284 (2013).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Rasmussen, S. G. et al. Crystal structure of the β2 adrenergic receptor–Gs protein complex. Nature 477, 549–555 (2011).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Maeda, S. et al. Development of an antibody fragment that stabilizes GPCR/G-protein complexes. Nat. Commun. 9, 3712 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Park, J. et al. Symmetric activation and modulation of the human calcium-sensing receptor. Proc. Natl Acad. Sci. USA 118, e2115849118 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Isberg, V. et al. Generic GPCR residue numbers—aligning topology maps while minding the gaps. Trends Pharmacol. Sci. 36, 22–31 (2015).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Ray, K., Fan, G. F., Goldsmith, P. K. & Spiegel, A. M. The carboxyl terminus of the human calcium receptor. Requirements for cell-surface expression and signal transduction. J. Biol. Chem. 272, 31355–31361 (1997).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Gama, L. & Breitwieser, G. E. A carboxyl-terminal domain controls the cooperativity for extracellular Ca2+ activation of the human calcium sensing receptor. A study with receptor-green fluorescent protein fusions. J. Biol. Chem. 273, 29712–29718 (1998).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Chang, W., Chen, T. H., Pratt, S. & Shoback, D. Amino acids in the second and third intracellular loops of the parathyroid Ca2+-sensing receptor mediate efficient coupling to phospholipase C. J. Biol. Chem. 275, 19955–19963 (2000).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Goolam, M. A. et al. Roles of intraloops-2 and -3 and the proximal C-terminus in signalling pathway selection from the human calcium-sensing receptor. FEBS Lett. 588, 3340–3346 (2014).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Gao, Y. et al. Asymmetric activation of the calcium-sensing receptor homodimer. Nature 595, 455–459 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wen, T. et al. Structural basis for activation and allosteric modulation of full-length calcium-sensing receptor. Sci. Adv. 7, eabg1483 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ling, S. et al. Structural mechanism of cooperative activation of the human calcium-sensing receptor by Ca2+ ions and L-tryptophan. Cell Res. 31, 383–394 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Chen, X. et al. Structural insights into the activation of human calcium-sensing receptor. eLife 10, e68578 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wall, M. A. et al. The structure of the G protein heterotrimer Giα1β1γ2. Cell 83, 1047–1058 (1995).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Flock, T. et al. Universal allosteric mechanism for Gα activation by GPCRs. Nature 524, 173–179 (2015).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Conklin, B. R., Farfel, Z., Lustig, K. D., Julius, D. & Bourne, H. R. Substitution of three amino acids switches receptor specificity of Gqα to that of Giα. Nature 363, 274–276 (1993).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Conklin, B. R. et al. Carboxyl-terminal mutations of Gq alpha and Gs alpha that alter the fidelity of receptor activation. Mol. Pharmacol. 50, 885–890 (1996).

    CAS 
    PubMed 

    Google Scholar
     

  • Bettler, B., Kaupmann, K., Mosbacher, J. & Gassmann, M. Molecular structure and physiological functions of GABAB receptors. Physiol. Rev. 84, 835–867 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Pollak, M. R. et al. Mutations in the human Ca2+-sensing receptor gene cause familial hypocalciuric hypercalcemia and neonatal severe hyperparathyroidism. Cell 75, 1297–1303 (1993).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Goehring, A. et al. Screening and large-scale expression of membrane proteins in mammalian cells for structural studies. Nat. Protoc. 9, 2574–2585 (2014).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Gorkhali, R. et al. Extracellular calcium alters calcium-sensing receptor network integrating intracellular calcium-signaling and related key pathway. Sci. Rep. 11, 20576 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ritchie, T. K. et al. Chapter 11—Reconstitution of membrane proteins in phospholipid bilayer nanodiscs. Methods Enzymol. 464, 211–231 (2009).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Reeves, P. J., Callewaert, N., Contreras, R. & Khorana, H. G. Structure and function in rhodopsin: high-level expression of rhodopsin with restricted and homogeneous N-glycosylation by a tetracycline-inducible N-acetylglucosaminyltransferase I-negative HEK293S stable mammalian cell line. Proc. Natl Acad. Sci. USA 99, 13419–13424 (2002).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Bepler, T. et al. Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographs. Nat. Methods 16, 1153–1160 (2019).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Punjani, A., Rubinstein, J. L., Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat. Methods 14, 290–296 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D Biol. Crystallogr. 66, 213–221 (2010).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Pettersen, E. F. et al. UCSF Chimera-a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605–1612 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D Biol. Crystallogr. 66, 486–501 (2010).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Thom, C. et al. Structures of neurokinin 1 receptor in complex with Gq and Gs proteins reveal substance P binding mode and unique activation features. Sci. Adv. 7, eabk2872 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Qu, X. et al. Structural basis of tethered agonism of the adhesion GPCRs ADGRD1 and ADGRF1. Nature 604, 779–785 (2022).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Cao, C. et al. Structure, function and pharmacology of human itch GPCRs. Nature 600, 170–175 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Johnson, R. M. et al. Cryo-EM structure of the dual incretin receptor agonist, peptide-19, in complex with the glucagon-like peptide-1 receptor. Biochem. Biophys. Res. Commun. 578, 84–90 (2021).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Moriarty, N. W., Grosse-Kunstleve, R. W. & Adams, P. D. electronic Ligand Builder and Optimization Workbench (eLBOW): a tool for ligand coordinate and restraint generation. Acta Crystallogr. D Biol. Crystallogr. 65, 1074–1080 (2009).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Chen, V. B. et al. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D Biol. Crystallogr. 66, 12–21 (2010).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Novotny, M., Madsen, D. & Kleywegt, G. J. Evaluation of protein fold comparison servers. Proteins 54, 260–270 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Goddard, T. D. et al. UCSF ChimeraX: meeting modern challenges in visualization and analysis. Protein Sci. 27, 14–25 (2018).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Morin, A. et al. Collaboration gets the most out of software. eLife 2, e01456 (2013).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Schrage, R. et al. The experimental power of FR900359 to study Gq-regulated biological processes. Nat. Commun. 6, 10156 (2015).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Olsen, R. H. J. et al. TRUPATH, an open-source biosensor platform for interrogating the GPCR transducerome. Nat. Chem. Biol. 16, 841–849 (2020).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

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  • Cassel, D. & Selinger, Z. Catecholamine-stimulated GTPase activity in turkey erythrocyte membranes. Biochim. Biophys. Acta 452, 538–551 (1976).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Rasmussen, S. G. et al. Crystal structure of the β2 adrenergic receptor–Gs protein complex. Nature 477, 549–555 (2011).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Noel, J. P., Hamm, H. E. & Sigler, P. B. The 2.2 Å crystal structure of transducin-α complexed with GTPγS. Nature 366, 654–663 (1993).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Van Eps, N. et al. Interaction of a G protein with an activated receptor opens the interdomain interface in the alpha subunit. Proc. Natl Acad. Sci. USA 108, 9420–9424 (2011).

    Article 
    ADS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Bornancin, F., Pfister, C. & Chabre, M. The transitory complex between photoexcited rhodopsin and transducin. Eur. J. Biochem. 184, 687–698 (1989).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Westfield, G. H. et al. Structural flexibility of the Gαs α-helical domain in the β2-adrenoceptor Gs complex. Proc. Natl Acad. Sci. USA 108, 16086–16091 (2011).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Coleman, D. et al. Structures of active conformations of Giα1 and the mechanism of GTP hydrolysis. Science 265, 1405–1412 (1994).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Namkung, Y. et al. Functional selectivity profiling of the angiotensin II type 1 receptor using pathway-wide BRET signaling sensors. Sci. Signal. https://doi.org/10.1126/scisignal.aat1631 (2018).

  • Bunemann, M., Frank, M. & Lohse, M. J. Gi protein activation in intact cells involves subunit rearrangement rather than dissociation. Proc. Natl Acad. Sci. USA 100, 16077–16082 (2003).

    Article 
    ADS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Manglik, A. et al. Structural insights into the dynamic process of β2-adrenergic receptor signaling. Cell 161, 1101–1111 (2015).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Liu, X. et al. Structural insights into the process of GPCR–G protein complex formation. Cell 177, 1243–1251.e12 (2019).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ma, X. et al. Analysis of β2AR-Gs and β2AR-Gi complex formation by NMR spectroscopy. Proc. Natl Acad. Sci. USA 117, 23096–23105 (2020).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Oldham, W. M., Van Eps, N., Preininger, A. M., Hubbell, W. L. & Hamm, H. E. Mechanism of the receptor-catalyzed activation of heterotrimeric G proteins. Nat. Struct. Mol. Biol. 13, 772–777 (2006).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Lambright, D. G., Noel, J. P., Hamm, H. E. & Sigler, P. B. Structural determinants for activation of the α-subunit of a heterotrimeric G protein. Nature 369, 621–628 (1994).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • García-Nafría, J. & Tate, C. G. Structure determination of GPCRs: cryo-EM compared with X-ray crystallography. Biochem. Soc. Trans. 49, 2345–2355 (2021).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Isberg, V. et al. GPCRdb: an information system for G protein-coupled receptors. Nucleic Acids Res. 44, D356–D364 (2016).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Pandy-Szekeres, G. et al. GPCRdb in 2018: adding GPCR structure models and ligands. Nucleic Acids Res. 46, D440–D446 (2018).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Manglik, A., Kobilka, B. K. & Steyaert, J. Nanobodies to study G protein-coupled receptor structure and function. Annu. Rev. Pharmacol. Toxicol. 57, 19–37 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Jang, W., Lu, S., Xu, X., Wu, G. & Lambert, N. A. The role of G protein conformation in receptor–G protein selectivity. Nat. Chem. Biol. https://doi.org/10.1038/s41589-022-01231-z (2023).

  • Qu, Q. et al. Insights into distinct signaling profiles of the µOR activated by diverse agonists. Nat. Chem. Biol. https://doi.org/10.1038/s41589-022-01208-y (2022).

  • Ross, E. M., Maguire, M. E., Sturgill, T. W., Biltonen, R. L. & Gilman, A. G. Relationship between the β-adrenergic receptor and adenylate cyclase. J. Biol. Chem. 252, 5761–5775 (1977).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Robison, G. A., Butcher, R. W. & Sutherland, E. W. Cyclic AMP. Annu. Rev. Biochem. 37, 149–174 (1968).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Torphy, T. J. β-Adrenoceptors, cAMP and airway smooth muscle relaxation: challenges to the dogma. Trends Pharmacol. Sci. 15, 370–374 (1994).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hall, I. P. in Encyclopedia of Respiratory Medicine (eds Laurent, G. J. & Shapiro, S. D.) 288–292 (Academic, 2006).

  • Lerch, M. T. et al. Viewing rare conformations of the β2 adrenergic receptor with pressure-resolved DEER spectroscopy. Proc. Natl Acad. Sci. USA 117, 31824–31831 (2020).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • De Lean, A., Stadel, J. M. & Lefkowitz, R. J. A ternary complex model explains the agonist-specific binding properties of the adenylate cyclase-coupled β-adrenergic receptor. J. Biol. Chem. 255, 7108–7117 (1980).

    Article 
    PubMed 

    Google Scholar
     

  • Wallukat, G. The β-adrenergic receptors. Herz 27, 683–690 (2002).

    Article 
    PubMed 

    Google Scholar
     

  • Xu, X. et al. Constrained catecholamines gain β2AR selectivity through allosteric effects on pocket dynamics. Nat. Commun. 14, 2138 (2023).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Punjani, A. & Fleet, D. J. 3D variability analysis: resolving continuous flexibility and discrete heterogeneity from single particle cryo-EM. J. Struct. Biol. 213, 107702 (2021).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Zhang, M. et al. Cryo-EM structure of an activated GPCR–G protein complex in lipid nanodiscs. Nat. Struct. Mol. Biol. 28, 258–267 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Traut, T. W. Physiological concentrations of purines and pyrimidines. Mol. Cell. Biochem. 140, 1–22 (1994).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hein, P. et al. Gs activation is time-limiting in initiating receptor-mediated signaling. J. Biol. Chem. 281, 33345–33351 (2006).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Gales, C. et al. Real-time monitoring of receptor and G-protein interactions in living cells. Nat. Methods 2, 177–184 (2005).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Gregorio, G. G. et al. Single-molecule analysis of ligand efficacy in β2AR–G-protein activation. Nature 547, 68–73 (2017).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Markby, D. W., Onrust, R. & Bourne, H. R. Separate GTP binding and GTPase activating domains of a Gα subunit. Science 262, 1895–1901 (1993).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Carpenter, B. & Tate, C. G. Engineering a minimal G protein to facilitate crystallisation of G protein-coupled receptors in their active conformation. Protein Eng. Des. Sel. 29, 583–594 (2016).

    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wan, Q. et al. Mini G protein probes for active G protein-coupled receptors (GPCRs) in live cells. J. Biol. Chem. 293, 7466–7473 (2018).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Bourne, H. R., Sanders, D. A. & McCormick, F. The GTPase superfamily: conserved structure and molecular mechanism. Nature 349, 117–127 (1991).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Graziano, M. P., Freissmuth, M. & Gilman, A. G. Expression of Gsα in Escherichia coli. Purification and properties of two forms of the protein. J. Biol. Chem. 264, 409–418 (1989).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Jones, J. C., Jones, A. M., Temple, B. R. & Dohlman, H. G. Differences in intradomain and interdomain motion confer distinct activation properties to structurally similar Gα proteins. Proc. Natl Acad. Sci. USA 109, 7275–7279 (2012).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Walker, J. E., Saraste, M., Runswick, M. J. & Gay, N. J. Distantly related sequences in the alpha- and beta-subunits of ATP synthase, myosin, kinases and other ATP-requiring enzymes and a common nucleotide binding fold. EMBO J. 1, 945–951 (1982).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Mixon, M. B. et al. Tertiary and quaternary structural changes in Giα1 induced by GTP hydrolysis. Science 270, 954–960 (1995).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Kaya, A. I. et al. A conserved phenylalanine as a relay between the α5 helix and the GDP binding region of heterotrimeric Gi protein α subunit. J. Biol. Chem. 289, 24475–24487 (2014).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ballesteros, J. A. & Weinstein, H. in Methods in Neurosciences Vol. 25 (ed. Sealfon, S. C.) 366–428 (Academic, 1995).

  • Sunahara, R. K., Tesmer, J. J., Gilman, A. G. & Sprang, S. R. Crystal structure of the adenylyl cyclase activator G. Science 278, 1943–1947 (1997).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Nygaard, R. et al. The dynamic process of β2-adrenergic receptor activation. Cell 152, 532–542 (2013).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Cherezov, V. et al. High-resolution crystal structure of an engineered human β2-adrenergic G protein-coupled receptor. Science 318, 1258–1265 (2007).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Dror, R. O. et al. Pathway and mechanism of drug binding to G-protein-coupled receptors. Proc. Natl Acad. Sci. USA 108, 13118–13123 (2011).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • DeVree, B. T. et al. Allosteric coupling from G protein to the agonist-binding pocket in GPCRs. Nature 535, 182–186 (2016).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Tsutsumi, N. et al. Atypical structural snapshots of human cytomegalovirus GPCR interactions with host G proteins. Sci. Adv. 8, eabl5442 (2022).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Batebi, H. et al. Mechanistic insights into G protein association with a G protein-coupled receptor. Preprint at Research Square https://doi.org/10.21203/rs.3.rs-2851358/v1 (2023).

  • Berriman, J. & Unwin, N. Analysis of transient structures by cryo-microscopy combined with rapid mixing of spray droplets. Ultramicroscopy 56, 241–252 (1994).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Chen, B. et al. Structural dynamics of ribosome subunit association studied by mixing-spraying time-resolved cryogenic electron microscopy. Structure 23, 1097–1105 (2015).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Kaledhonkar, S., Fu, Z., White, H. & Frank, J. Time-resolved cryo-electron microscopy using a microfluidic chip. Methods Mol. Biol. 1764, 59–71 (2018).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Feng, X. et al. A fast and effective microfluidic spraying-plunging method for high-resolution single-particle cryo-EM. Structure 25, 663–670.e663 (2017).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ménétret, J. F., Hofmann, W., Schröder, R. R., Rapp, G. & Goody, R. S. Time-resolved cryo-electron microscopic study of the dissociation of actomyosin induced by photolysis of photolabile nucleotides. J. Mol. Biol. 219, 139–144 (1991).

    Article 
    PubMed 

    Google Scholar
     

  • Yoder, N. et al. Light-coupled cryo-plunger for time-resolved cryo-EM. J. Struct. Biol. 212, 107624 (2020).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Punjani, A. & Fleet, D. 3D flexible refinement: structure and motion of flexible proteins from cryo-EM. Microsc. Microanal. 28, 1218–1218 (2022).

    Article 
    ADS 

    Google Scholar
     

  • Nakane, T., Kimanius, D., Lindahl, E. & Scheres, S. H. W. Characterisation of molecular motions in cryo-EM single-particle data by multi-body refinement in RELION. eLife 7, e36861 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Zhong, E. D., Bepler, T., Berger, B. & Davis, J. H. CryoDRGN: reconstruction of heterogeneous cryo-EM structures using neural networks. Nat. Methods 18, 176–185 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Frank, J. & Ourmazd, A. Continuous changes in structure mapped by manifold embedding of single-particle data in cryo-EM. Methods 100, 61–67 (2016).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Dashti, A. et al. Retrieving functional pathways of biomolecules from single-particle snapshots. Nat. Commun. 11, 4734 (2020).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Hilger, D. et al. Structural insights into differences in G protein activation by family A and family B GPCRs. Science https://doi.org/10.1126/science.aba3373 (2020).

  • Mastronarde, D. N. Automated electron microscope tomography using robust prediction of specimen movements. J. Struct. Biol. 152, 36–51 (2005).

    Article 
    PubMed 

    Google Scholar
     

  • Punjani, A., Rubinstein, J. L., Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat. Methods 14, 290–296 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Pettersen, E. F. et al. UCSF Chimera—a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605–1612 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Pettersen, E. F. et al. UCSF ChimeraX: structure visualization for researchers, educators, and developers. Protein Sci. 30, 70–82 (2021).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Tomasello, G., Armenia, I. & Molla, G. The Protein Imager: a full-featured online molecular viewer interface with server-side HQ-rendering capabilities. Bioinformatics 36, 2909–2911 (2020).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D 66, 486–501 (2010).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Liebschner, D. et al. Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix. Acta Crystallogr. D 75, 861–877 (2019).

    Article 
    ADS 
    CAS 

    Google Scholar
     

  • Robertson, M. J., van Zundert, G. C. P., Borrelli, K. & Skiniotis, G. GemSpot: a pipeline for robust modeling of ligands into Cryo-EM maps. Structure https://doi.org/10.1016/j.str.2020.04.018 (2020).

  • Kluyver, T. et al. Jupyter Notebooks – a publishing format for reproducible computational workflows. in International Conference on Electronic Publishing (eds Loizides, F. & Schmidt, B.) 87–90 (IOS Press, 2016).

  • Pérez-Hernández, G. & Hildebrand, P. W. mdciao: accessible analysis and visualization of molecular dynamics simulation data. Preprint at bioRxiv https://doi.org/10.1101/2022.07.15.500163 (2022).

  • Peisley, A. & Skiniotis, G. 2D projection analysis of GPCR complexes by negative stain electron microscopy. Methods Mol. Biol. 1335, 29–38 (2015).

    Article 
    PubMed 

    Google Scholar
     

  • Jo, S., Kim, T., Iyer, V. G. & Im, W. CHARMM-GUI: a web-based graphical user interface for CHARMM. J. Comput. Chem. 29, 1859–1865 (2008).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Dror, R. O. et al. Identification of two distinct inactive conformations of the β2-adrenergic receptor reconciles structural and biochemical observations. Proc. Natl Acad. Sci. USA 106, 4689–4694 (2009).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Jorgensen, W. L., Chandrasekhar, J., Madura, J. D., Impey, R. W. & Klein, M. L. Comparison of simple potential functions for simulating liquid water. J. Chem. Phys. 79, 926–935 (1983).

    Article 
    ADS 
    CAS 

    Google Scholar
     

  • Klauda, J. B. et al. Update of the CHARMM all-atom additive force field for lipids: validation on six lipid types. J. Phys. Chem. B 114, 7830–7843 (2010).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Vanommeslaeghe, K. et al. CHARMM general force field: a force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields. J. Comput. Chem. 31, 671–690 (2010).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Abraham, M. J. et al. GROMACS: high performance molecular simulations through multi-level parallelism from laptops to supercomputers. SoftwareX 1-2, 19–25 (2015).

    Article 
    ADS 

    Google Scholar
     

  • Humphrey, W., Dalke, A. & Schulten, K. VMD: visual molecular dynamics. J. Mol. Graph. 14, 33–38 (1996). 27-38.

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Rose, A. S. & Hildebrand, P. W. NGL Viewer: a web application for molecular visualization. Nucleic Acids Res. 43, W576–W579 (2015).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Tiemann, J. K. S., Guixà-González, R., Hildebrand, P. W. & Rose, A. S. MDsrv: viewing and sharing molecular dynamics simulations on the web. Nat. Methods 14, 1123–1124 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Bussi, G., Donadio, D. & Parrinello, M. Canonical sampling through velocity rescaling. J. Chem. Phys. 126, 014101 (2007).

    Article 
    ADS 
    PubMed 

    Google Scholar
     

  • Parrinello, M. & Rahman, A. Polymorphic transitions in single crystals: a new molecular dynamics method. J. Appl. Phys. 52, 7182–7190 (1981).

    Article 
    ADS 
    CAS 

    Google Scholar
     

  • Darden, T., York, D. & Pedersen, L. Particle mesh Ewald: an Nlog(N) method for Ewald sums in large systems. J. Chem. Phys. 98, 10089–10092 (1993).

    Article 
    ADS 
    CAS 

    Google Scholar
     

  • Hess, B., Bekker, H., Berendsen, H. J. C. & Fraaije, J. G. E. M. LINCS: a linear constraint solver for molecular simulations. J. Comput. Chem. 18, 1463–1472 (1997).

    Article 
    CAS 

    Google Scholar
     

  • McGibbon, R. T. et al. MDTraj: a modern open library for the analysis of molecular dynamics trajectories. Biophys. J. 109, 1528–1532 (2015).

  • Pearson, K. LIII. On lines and planes of closest fit to systems of points in space. Lond. Edinb. Dublin Philos. Mag. J. Sci. 2, 559–572 (1901).

    Article 

    Google Scholar
     

  • Hotelling, H. Analysis of a complex of statistical variables into principal components. J Educ Psychol 24, 417–441 (1933).

    Article 

    Google Scholar
     

  • Scherer, M. K. et al. PyEMMA 2: A Software Package for Estimation, Validation, and Analysis of Markov Models. J. Chem. Theory Comput. 11, 5525–5542 (2015).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • d’Errico, M., Facco, E., Laio, A. & Rodriguez, A. Automatic topography of high-dimensional data sets by non-parametric density peak clustering. Inf. Sci. 560, 476–492 (2021).

    Article 
    MathSciNet 

    Google Scholar
     

  • Pérez-Hernández, G., Batebi, H., & Hildebrand, P. W. Molecular simulation data associated with the manuscript ‘Time-resolved cryo-EM of G protein activation by a GPCR’. Zenodo https://doi.org/10.5281/zenodo.10548787 (2024).

  • Tan, Y. Z. et al. Addressing preferred specimen orientation in single-particle cryo-EM through tilting. Nat. Methods 14, 793–796 (2017).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • [ad_2]

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  • Allosteric modulation and G-protein selectivity of the Ca2+-sensing receptor

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  • Kniazeff, J., Prézeau, L., Rondard, P., Pin, J.-P. & Goudet, C. Dimers and beyond: the functional puzzles of class C GPCRs. Pharmacol. Ther. 130, 9–25 (2011).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hofer, A. M. & Brown, E. M. Extracellular calcium sensing and signalling. Nat. Rev. Mol. Cell Biol. 4, 530–538 (2003).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hannan, F. M., Kallay, E., Chang, W., Brandi, M. L. & Thakker, R. V. The calcium-sensing receptor in physiology and in calcitropic and noncalcitropic diseases. Nat. Rev. Endocrinol. 15, 33–51 (2019).

    Article 
    CAS 

    Google Scholar
     

  • Vahe, C. et al. Diseases associated with calcium-sensing receptor. Orphanet J. Rare Dis. 12, 19 (2017).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Massy, Z. A., Henaut, L., Larsson, T. E. & Vervloet, M. G. Calcium-sensing receptor activation in chronic kidney disease: effects beyond parathyroid hormone control. Semin. Nephrol. 34, 648–659 (2014).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Eckardt, K.-U. et al. Evolving importance of kidney disease: from subspecialty to global health burden. Lancet 382, 158–169 (2013).

    Article 
    PubMed 

    Google Scholar
     

  • Niswender, C. M. & Conn, P. J. Metabotropic glutamate receptors: physiology, pharmacology, and disease. Annu. Rev. Pharmacol. Toxicol. 50, 295–322 (2010).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Gregory, K. J. & Goudet, C. International union of basic and clinical pharmacology. CXI. Pharmacology, signaling, and physiology of metabotropic glutamate receptors. Pharmacol. Rev. 73, 521–569 (2021).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Leach, K. et al. International Union of Basic and Clinical Pharmacology. CVIII. Calcium-sensing receptor nomenclature, pharmacology, and function. Pharmacol. Rev. 72, 558–604 (2020).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Seven, A. B. et al. G-protein activation by a metabotropic glutamate receptor. Nature 595, 450–454 (2021).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Lin, S. et al. Structures of Gi-bound metabotropic glutamate receptors mGlu2 and mGlu4. Nature 594, 583–588 (2021).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Shen, C. et al. Structural basis of GABAB receptor–Gi protein coupling. Nature 594, 594–598 (2021).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Magno, A. L., Ward, B. K. & Ratajczak, T. The calcium-sensing receptor: a molecular perspective. Endocr. Rev. 32, 3–30 (2011).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Centeno, P. P. et al. Phosphate acts directly on the calcium-sensing receptor to stimulate parathyroid hormone secretion. Nat. Commun. 10, 4693 (2019).

    Article 
    ADS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Leach, K. et al. Towards a structural understanding of allosteric drugs at the human calcium-sensing receptor. Cell Res. 26, 574–592 (2016).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Ling, S. et al. Structural mechanism of cooperative activation of the human calcium-sensing receptor by Ca2+ ions and l-tryptophan. Cell Res. 31, 383–394 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Gao, Y. et al. Asymmetric activation of the calcium-sensing receptor homodimer. Nature 595, 455–459 (2021).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Park, J. et al. Symmetric activation and modulation of the human calcium-sensing receptor. Proc. Natl Acad. Sci. USA 118, e2115849118 (2021).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Olsen, R. H. et al. TRUPATH, an open-source biosensor platform for interrogating the GPCR transducerome. Nat. Chem. Biol. 16, 841–849 (2020).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Masuho, I. et al. Distinct profiles of functional discrimination among G proteins determine the actions of G protein–coupled receptors. Sci. Signal. 8, ra123 (2015).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Wall, M. A. et al. The structure of the G-protein heterotrimer Giα1β1γ2. Cell 83, 1047–1058 (1995).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Duan, J. et al. Cryo-EM structure of an activated VIP1 receptor-G protein complex revealed by a NanoBiT tethering strategy. Nat. Commun. 11, 4121 (2020).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Timmers, H., Karperien, M., Hamdy, N., De Boer, H. & Hermus, A. Normalization of serum calcium by cinacalcet in a patient with hypercalcaemia due to a de novo inactivating mutation of the calcium-sensing receptor. J. Intern. Med. 260, 177–182 (2006).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Hannan, F. M. et al. Identification of 70 calcium-sensing receptor mutations in hyper-and hypo-calcaemic patients: evidence for clustering of extracellular domain mutations at calcium-binding sites. Hum. Mol. Genet. 21, 2768–2778 (2012).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Nagase, T. et al. A family of autosomal dominant hypocalcemia with a positive correlation between serum calcium and magnesium: identification of a novel gain of function mutation (Ser820Phe) in the calcium-sensing receptor. J. Clin. Endocrinol. Metab. 87, 2681–2687 (2002).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Shiohara, M. et al. A novel gain-of-function mutation (F821L) in the transmembrane domain of calcium-sensing receptor is a cause of severe sporadic hypoparathyroidism. Eur. J. Pediatr. 163, 94–98 (2004).

    Article 
    PubMed 

    Google Scholar
     

  • Hu, J. et al. A region in the seven-transmembrane domain of the human Ca2+ receptor critical for response to Ca2+. J. Biol. Chem. 280, 5113–5120 (2005).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Quinn, S. J. et al. The Ca2+-sensing receptor: a target for polyamines. Am. J. Physiol. 273, C1315–C1323 (1997).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Michael, A. J. Polyamines in eukaryotes, bacteria, and archaea. J. Biol. Chem. 291, 14896–14903 (2016).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Schamber, M. R. & Vafabakhsh, R. Mechanism of sensitivity modulation in the calcium-sensing receptor via electrostatic tuning. Nat. Commun. 13, 2194 (2022).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Cole, D. E. et al. Calcium-sensing receptor mutations and denaturing high performance liquid chromatography. J. Mol. Endocrinol. 42, 331–339 (2009).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Tan, Y. et al. Autosomal dominant hypocalcemia: a novel activating mutation (E604K) in the cysteine-rich domain of the calcium-sensing receptor. J. Clin. Endocrinol. Metab. 88, 605–610 (2003).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Kwan, B. et al. A novel CASR mutation (p. Glu757Lys) causing autosomal dominant hypocalcaemia type 1. Endocrinol. Diabetes Metab. Case Rep. 2018, 18-0107 (2018).

    PubMed 
    PubMed Central 

    Google Scholar
     

  • Conigrave, A. D., Quinn, S. J. & Brown, E. M. l-amino acid sensing by the extracellular Ca2+-sensing receptor. Proc. Natl Acad. Sci. USA 97, 4814–4819 (2000).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Mangmool, S. & Kurose, H. Gi/o protein-dependent and-independent actions of pertussis toxin (PTX). Toxins 3, 884–899 (2011).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Vargas-Poussou, R. et al. Familial hypocalciuric hypercalcemia types 1 and 3 and primary hyperparathyroidism: similarities and differences. J. Clin. Endocrinol. Metab. 101, 2185–2195 (2016).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Koltin, D. et al. Mild infantile hypercalcemia: diagnostic tests and outcomes. J. Pediatr. 159, 215–221 (2011).

    Article 
    PubMed 

    Google Scholar
     

  • Ray, K., Fan, G.-F., Goldsmith, P. K. & Spiegel, A. M. The carboxyl terminus of the human calcium receptor: requirements for cell-surface expression and signal transduction. J. Biol. Chem. 272, 31355–31361 (1997).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Nesbit, M. A. et al. Mutations affecting G-protein subunit α11 in hypercalcemia and hypocalcemia. N. Engl. J. Med. 368, 2476–2486 (2013).

    Article 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Bai, M. et al. Protein kinase C phosphorylation of threonine at position 888 in Ca2+o-sensing receptor (CaR) inhibits coupling to Ca2+ store release. J. Biol. Chem. 273, 21267–21275 (1998).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Davies, S. L., Ozawa, A., McCormick, W. D., Dvorak, M. M. & Ward, D. T. Protein kinase C-mediated phosphorylation of the calcium-sensing receptor is stimulated by receptor activation and attenuated by calyculin-sensitive phosphatase activity. J. Biol. Chem. 282, 15048–15056 (2007).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Jiang, Y. F. et al. Protein kinase C (PKC) phosphorylation of the Ca2+o-sensing receptor (CaR) modulates functional interaction of G proteins with the CaR cytoplasmic tail. J. Biol. Chem. 277, 50543–50549 (2002).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Lazarus, S. et al. A novel mutation of the primary protein kinase C phosphorylation site in the calcium-sensing receptor causes autosomal dominant hypocalcemia. Eur. J. Endocrinol. 164, 429–435 (2011).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Brown, E. M. et al. Cloning and characterization of an extracellular Ca2+-sensing receptor from bovine parathyroid. Nature 366, 575–580 (1993).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Robertson, M. J., Meyerowitz, J. G., Panova, O., Borrelli, K. & Skiniotis, G. Plasticity in ligand recognition at somatostatin receptors. Nat. Struct. Mol. Biol. 29, 210–217 (2022).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Maeda, S. et al. Development of an antibody fragment that stabilizes GPCR/G-protein complexes. Nat. Commun. 9, 3712 (2018).

    Article 
    ADS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Bayburt, T. H., Grinkova, Y. V. & Sligar, S. G. Self-assembly of discoidal phospholipid bilayer nanoparticles with membrane scaffold proteins. Nano Lett. 2, 853–856 (2002).

    Article 
    ADS 
    CAS 

    Google Scholar
     

  • Peisley, A. & Skiniotis, G. 2D projection analysis of GPCR complexes by negative stain electron microscopy. Methods Mol. Biol. 1335, 29–38 (2015).

  • Mastronarde, D. N. Automated electron microscope tomography using robust prediction of specimen movements. J. Struct. Biol. 152, 36–51 (2005).

    Article 
    PubMed 

    Google Scholar
     

  • Punjani, A., Rubinstein, J. L., Fleet, D. J. & Brubaker, M. A. cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination. Nat. Methods 14, 290–296 (2017).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Zivanov, J. et al. New tools for automated high-resolution cryo-EM structure determination in RELION-3. eLife 7, e42166 (2018).

    Article 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Pettersen, E. F. et al. UCSF Chimera—a visualization system for exploratory research and analysis. J. Comput. Chem. 25, 1605–1612 (2004).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Zhang, X. et al. Structures of the human cholecystokinin receptors bound to agonists and antagonists. Nat. Chem. Biol. 17, 1230–1237 (2021).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Emsley, P., Lohkamp, B., Scott, W. G. & Cowtan, K. Features and development of Coot. Acta Crystallogr. D 66, 486–501 (2010).

    Article 
    ADS 
    CAS 
    PubMed 
    PubMed Central 

    Google Scholar
     

  • Liebschner, D. et al. Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix. Acta Crystallogr. D 75, 861–877 (2019).

    Article 
    ADS 
    CAS 

    Google Scholar
     

  • Chen, V. B. et al. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D 66, 12–21 (2010).

    Article 
    ADS 
    CAS 
    PubMed 

    Google Scholar
     

  • Pettersen, E. F. et al. UCSF ChimeraX: structure visualization for researchers, educators, and developers. Protein Sci. 30, 70–82 (2021).

    Article 
    CAS 
    PubMed 

    Google Scholar
     

  • Falk‐Petersen, C. B. et al. Development of a robust mammalian cell‐based assay for studying recombinant α4β1/3δ GABAA receptor subtypes. Basic Clin. Pharmacol. Toxicol. 121, 119–129 (2017).

    Article 
    PubMed 

    Google Scholar
     

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